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A natural history of vision loss - supplementary information

dataset
posted on 25.01.2022, 16:52 by Alexandra de SousaAlexandra de Sousa, Orlin S. TodorovOrlin S. Todorov, Michael Proulx
These data are supplementary files for the following journal article published in Neuroscience and Biobehavioural Reviews in January 2022.

de Sousa, A.A. Todorov, O.S. and Proulx, M.J. (2022) 'A natural history of vision loss: insight from evolution for human visual function.' Neuroscience & Biobehavioral Reviews. e104550. DOI: 10.1016/j.neubiorev.2022.104550.


The three files attached to this record are as follows:


1. markdown_vision_loss.Rmd

R code used for creating figures


2. acuityblind.csv

Visual acuity data for mammals (with PanTHERIA data http://esapubs.org/archive/ecol/E090/184/)

MT = method: A= anatomical, B = behavioral, C = subcutaneous eyes

Sources:
Dooley JC, Nguyen HM, Seelke AMH, Krubitzer L. (2012). Visual acuity in the short-tailed opossum (Monodelphis domestica). Neuroscience. 223:124–30.
Heffner RS, Heffner HE. (1992). Visual factors in sound localization in mammals. J Comp Neurol, 317(3):219-32.
Heffner, R. S., Koay, G., & Heffner, H. E. (1999). Sound localization in an Old-World fruit bat (Rousettus aegyptiacus): acuity, use of binaural cues, and relationship to vision. J Comp Psychol, 113(3):297-306.
Heffner, R. S., Koay, G., & Heffner, H. E. (2008). Sound localization acuity and its relation to vision in large and small fruit-eating bats: II. Non-echolocating species, Eidolon helvum and Cynopterus brachyotis. Hear Res, 241(1-2): 80-86.
Kirk E, Kay R. (2004). The evolution of high visual acuity in the Anthropoidea. In: Ross C, Kay R, eds. Anthropoid origins: new visions. New York: Kluwer Academic/Plenum Publishers.
Pettigrew JD, Manger PR, Fine SLB. (1998). The sensory world of the platypus. Philos Trans R Soc B Biol Sci, 353:1199–210.
Veilleux CC, Kirk EC. (2014) Visual acuity in mammals: Effects of eye size and ecology. Brain Behav Evol, 83(1):43-53.


3. tree.nwk from TimeTree

S. Kumar, G. Stecher, M. Suleski, and S.B. Hedges, 2017. TimeTree: a resource for timelines, timetrees, and divergence times. Molecular Biology and Evolution 34: 1812-1819, DOI: 10.1093/molbev/msx116.

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